abyss on AUR (Arch User Repository)

Last updated: May 02,2024

1. Install "abyss" effortlessly via AUR with the help of a helper(YAY)

a. Install YAY (https://github.com/Jguer/yay)


    
        
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                sudo pacman -S --needed git base-devel && git clone https://aur.archlinux.org/yay.git && cd yay && makepkg -si
            
                    
    
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b. Install abyss on Arch using YAY

* (Optional) Uninstall abyss on Arch using YAY

2. Manually Install "abyss" via AUR

a. Ensure you have the base development tools and git installed with:


    
        
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                sudo pacman -S --needed
            
                        
                base-devel git
            
                    
    
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b. Clone abyss's git locally


    
        
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                git clone https://aur.archlinux.org/abyss.git 
            
                        
                ~/abyss
            
                    
    
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c. Go to ~/abyss folder and install it


   
    
        
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                cd
            
                        
                ~/abyss
            
                    
    
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                makepkg -si
            
                    
    
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3. Information about the abyss package on Arch User Repository (AUR)

ID: 1266543
Name: abyss
PackageBaseID: 59557
PackageBase: abyss
Version: 2.3.7-2
Description: Assembly By Short Sequences - a de novo, parallel, paired-end sequence assembler
URL: https://github.com/bcgsc/abyss
NumVotes: 1
Popularity: 0
OutOfDate:
Maintainer: malacology
Submitter: Synchronicity
FirstSubmitted: 1338136014
LastModified: 1685666255
URLPath: /cgit/aur.git/snapshot/abyss.tar.gz