bcl2fastq-bin on AUR (Arch User Repository)

Last updated: May 21,2024

1. Install "bcl2fastq-bin" effortlessly via AUR with the help of a helper(YAY)

a. Install YAY (https://github.com/Jguer/yay)

$ sudo pacman -S --needed git base-devel && git clone https://aur.archlinux.org/yay.git && cd yay && makepkg -si

b. Install bcl2fastq-bin on Arch using YAY

$ yay -S bcl2fastq-bin

* (Optional) Uninstall bcl2fastq-bin on Arch using YAY

$ yay -Rns bcl2fastq-bin

2. Manually Install "bcl2fastq-bin" via AUR

a. Ensure you have the base development tools and git installed with:

$ sudo pacman -S --needed base-devel git

b. Clone bcl2fastq-bin's git locally

$ git clone https://aur.archlinux.org/bcl2fastq-bin.git ~/bcl2fastq-bin

c. Go to ~/bcl2fastq-bin folder and install it

$ cd ~/bcl2fastq-bin $ makepkg -si

3. Information about the bcl2fastq-bin package on Arch User Repository (AUR)

ID: 494708
Name: bcl2fastq-bin
PackageBaseID: 129723
PackageBase: bcl2fastq-bin
Version: 2.20.0.422-2
Description: Demultiplexes data and converts BCL files generated by Illumina sequencers to FASTQ for downstream analysis
URL: https://support.illumina.com/downloads/bcl2fastq-conversion-software-v2-20.html
NumVotes: 0
Popularity: 0
OutOfDate: 1703081298
Maintainer: balwierz
Submitter: clintval
FirstSubmitted: 1517627595
LastModified: 1521161484
URLPath: /cgit/aur.git/snapshot/bcl2fastq-bin.tar.gz