cufflinks-git on AUR (Arch User Repository)

Last updated: November 26,2024

1. Install "cufflinks-git" effortlessly via AUR with the help of a helper(YAY)

a. Install YAY (https://github.com/Jguer/yay)


    
        
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                sudo pacman -S --needed git base-devel && git clone https://aur.archlinux.org/yay.git && cd yay && makepkg -si
            
                    
    
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b. Install cufflinks-git on Arch using YAY


    
        
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                yay -S
            
                        
                cufflinks-git
            
                    
    
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* (Optional) Uninstall cufflinks-git on Arch using YAY


    
        
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                yay -Rns
            
                        
                cufflinks-git
            
                    
    
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2. Manually Install "cufflinks-git" via AUR

a. Ensure you have the base development tools and git installed with:


    
        
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                sudo pacman -S --needed
            
                        
                base-devel git
            
                    
    
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b. Clone cufflinks-git's git locally


    
        
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                git clone https://aur.archlinux.org/cufflinks-git.git 
            
                        
                ~/cufflinks-git
            
                    
    
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c. Go to ~/cufflinks-git folder and install it


   
    
        
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                cd
            
                        
                ~/cufflinks-git
            
                    
    
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                makepkg -si
            
                    
    
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3. Information about the cufflinks-git package on Arch User Repository (AUR)

ID: 615878
Name: cufflinks-git
PackageBaseID: 142317
PackageBase: cufflinks-git
Version: v2.2.1.r83.gb4fa050-1
Description: Cufflinks assembles transcripts, estimates their abundances, and tests for differential expression and regulation in RNA-Seq samples..
URL: http://cole-trapnell-lab.github.io/projects/cufflinks/
NumVotes: 0
Popularity: 0
OutOfDate: 1686905466
Maintainer: greyltc
Submitter: greyltc
FirstSubmitted: 1558816073
LastModified: 1558816073
URLPath: /cgit/aur.git/snapshot/cufflinks-git.tar.gz