gatk on AUR (Arch User Repository)

Last updated: November 23,2024

1. Install "gatk" effortlessly via AUR with the help of a helper(YAY)

a. Install YAY (https://github.com/Jguer/yay)

$ sudo pacman -S --needed git base-devel && git clone https://aur.archlinux.org/yay.git && cd yay && makepkg -si

b. Install gatk on Arch using YAY

$ yay -S gatk

* (Optional) Uninstall gatk on Arch using YAY

$ yay -Rns gatk

2. Manually Install "gatk" via AUR

a. Ensure you have the base development tools and git installed with:

$ sudo pacman -S --needed base-devel git

b. Clone gatk's git locally

$ git clone https://aur.archlinux.org/gatk.git ~/gatk

c. Go to ~/gatk folder and install it

$ cd ~/gatk $ makepkg -si

3. Information about the gatk package on Arch User Repository (AUR)

ID: 1369393
Name: gatk
PackageBaseID: 178040
PackageBase: gatk
Version: 4.5.0.0-1
Description: Genome Analysis Toolkit https://doi.org/10.1101/gr.107524.110
URL: https://software.broadinstitute.org/gatk
NumVotes: 1
Popularity: 0.001075
OutOfDate:
Maintainer: malacology
Submitter: malacology
FirstSubmitted: 1650212995
LastModified: 1702512504
URLPath: /cgit/aur.git/snapshot/gatk.tar.gz