hapsembler on AUR (Arch User Repository)

Last updated: December 24,2024

Deprecated! Installation of this package may no longer be supported.

1. Install "hapsembler" effortlessly via AUR with the help of a helper(YAY)

a. Install YAY (https://github.com/Jguer/yay)


    
        
            $
        

        
            
                sudo pacman -S --needed git base-devel && git clone https://aur.archlinux.org/yay.git && cd yay && makepkg -si
            
                    
    
    Copied

b. Install hapsembler on Arch using YAY

* (Optional) Uninstall hapsembler on Arch using YAY

2. Manually Install "hapsembler" via AUR

a. Ensure you have the base development tools and git installed with:


    
        
            $
        

        
            
                sudo pacman -S --needed
            
                        
                base-devel git
            
                    
    
    Copied

b. Clone hapsembler's git locally


    
        
            $
        

        
            
                git clone https://aur.archlinux.org/hapsembler.git 
            
                        
                ~/hapsembler
            
                    
    
    Copied

c. Go to ~/hapsembler folder and install it


   
    
        
            $
        

        
            
                cd
            
                        
                ~/hapsembler
            
                    
    
    Copied

    

   
    
        
            $
        

        
            
                makepkg -si
            
                    
    
    Copied

3. Information about the hapsembler package on Arch User Repository (AUR)

ID: 194368
Name: hapsembler
PackageBaseID: 89630
PackageBase: hapsembler
Version: 2.21-1
Description: haplotype-specific genome assembly toolkit
URL: http://compbio.cs.toronto.edu/hapsembler/
NumVotes: 1
Popularity: 0
OutOfDate:
Maintainer:
Submitter: wookietreiber
FirstSubmitted: 1421764063
LastModified: 1434189407
URLPath: /cgit/aur.git/snapshot/hapsembler.tar.gz