hisat2-git on AUR (Arch User Repository)

Last updated: December 27,2024

1. Install "hisat2-git" effortlessly via AUR with the help of a helper(YAY)

a. Install YAY (https://github.com/Jguer/yay)


    
        
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                sudo pacman -S --needed git base-devel && git clone https://aur.archlinux.org/yay.git && cd yay && makepkg -si
            
                    
    
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b. Install hisat2-git on Arch using YAY

* (Optional) Uninstall hisat2-git on Arch using YAY

2. Manually Install "hisat2-git" via AUR

a. Ensure you have the base development tools and git installed with:


    
        
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                sudo pacman -S --needed
            
                        
                base-devel git
            
                    
    
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b. Clone hisat2-git's git locally


    
        
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                git clone https://aur.archlinux.org/hisat2-git.git 
            
                        
                ~/hisat2-git
            
                    
    
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c. Go to ~/hisat2-git folder and install it


   
    
        
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                cd
            
                        
                ~/hisat2-git
            
                    
    
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                makepkg -si
            
                    
    
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3. Information about the hisat2-git package on Arch User Repository (AUR)

ID: 1239386
Name: hisat2-git
PackageBaseID: 159113
PackageBase: hisat2-git
Version: 2.2.1.r55.g5086938-1
Description: A fast and sensitive alignment program for mapping sequencing reads
URL: https://daehwankimlab.github.io/hisat2/
NumVotes: 0
Popularity: 0
OutOfDate:
Maintainer: Chocobo1
Submitter: Chocobo1
FirstSubmitted: 1603560193
LastModified: 1681153711
URLPath: /cgit/aur.git/snapshot/hisat2-git.tar.gz