mmseqs2-avx2 on AUR (Arch User Repository)

Last updated: June 30,2024

1. Install "mmseqs2-avx2" effortlessly via AUR with the help of a helper(YAY)

a. Install YAY (https://github.com/Jguer/yay)


    
        
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                sudo pacman -S --needed git base-devel && git clone https://aur.archlinux.org/yay.git && cd yay && makepkg -si
            
                    
    
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b. Install mmseqs2-avx2 on Arch using YAY


    
        
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                yay -S
            
                        
                mmseqs2-avx2
            
                    
    
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* (Optional) Uninstall mmseqs2-avx2 on Arch using YAY


    
        
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                yay -Rns
            
                        
                mmseqs2-avx2
            
                    
    
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2. Manually Install "mmseqs2-avx2" via AUR

a. Ensure you have the base development tools and git installed with:


    
        
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                sudo pacman -S --needed
            
                        
                base-devel git
            
                    
    
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b. Clone mmseqs2-avx2's git locally


    
        
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                git clone https://aur.archlinux.org/mmseqs2-avx2.git 
            
                        
                ~/mmseqs2-avx2
            
                    
    
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c. Go to ~/mmseqs2-avx2 folder and install it


   
    
        
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                cd
            
                        
                ~/mmseqs2-avx2
            
                    
    
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                makepkg -si
            
                    
    
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3. Information about the mmseqs2-avx2 package on Arch User Repository (AUR)

ID: 1352890
Name: mmseqs2-avx2
PackageBaseID: 199532
PackageBase: mmseqs2
Version: 15.6f452-2
Description: ultra fast and sensitive search and clustering suite optimised for AVX2 instructions. https://doi.org/10.1038/nbt.3988
URL: https://github.com/soedinglab/mmseqs2
NumVotes: 0
Popularity: 0
OutOfDate:
Maintainer: kbipinkumar
Submitter: kbipinkumar
FirstSubmitted: 1699929807
LastModified: 1699942221
URLPath: /cgit/aur.git/snapshot/mmseqs2-avx2.tar.gz