python-bcbio-nextgen on AUR (Arch User Repository)

Last updated: December 25,2024

Deprecated! Installation of this package may no longer be supported.

1. Install "python-bcbio-nextgen" effortlessly via AUR with the help of a helper(YAY)

a. Install YAY (https://github.com/Jguer/yay)


    
        
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                sudo pacman -S --needed git base-devel && git clone https://aur.archlinux.org/yay.git && cd yay && makepkg -si
            
                    
    
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b. Install python-bcbio-nextgen on Arch using YAY


    
        
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                yay -S
            
                        
                python-bcbio-nextgen
            
                    
    
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* (Optional) Uninstall python-bcbio-nextgen on Arch using YAY


    
        
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                yay -Rns
            
                        
                python-bcbio-nextgen
            
                    
    
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2. Manually Install "python-bcbio-nextgen" via AUR

a. Ensure you have the base development tools and git installed with:


    
        
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                sudo pacman -S --needed
            
                        
                base-devel git
            
                    
    
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b. Clone python-bcbio-nextgen's git locally


    
        
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                git clone https://aur.archlinux.org/python-bcbio-nextgen.git 
            
                        
                ~/python-bcbio-nextgen
            
                    
    
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c. Go to ~/python-bcbio-nextgen folder and install it


   
    
        
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                cd
            
                        
                ~/python-bcbio-nextgen
            
                    
    
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                makepkg -si
            
                    
    
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3. Information about the python-bcbio-nextgen package on Arch User Repository (AUR)

ID: 551006
Name: python-bcbio-nextgen
PackageBaseID: 136588
PackageBase: python-bcbio-nextgen
Version: 1.1.0-00
Description: Best-practice pipelines for fully automated high throughput sequencing analysis
URL: https://github.com/bcbio/bcbio-nextgen
NumVotes: 0
Popularity: 0
OutOfDate: 1631943416
Maintainer:
Submitter: mollitz
FirstSubmitted: 1539260560
LastModified: 1539260560
URLPath: /cgit/aur.git/snapshot/python-bcbio-nextgen.tar.gz