r-bsgenome.hsapiens.ucsc.hg38 on AUR (Arch User Repository)

Last updated: January 11,2025

1. Install "r-bsgenome.hsapiens.ucsc.hg38" effortlessly via AUR with the help of a helper(YAY)

a. Install YAY (https://github.com/Jguer/yay)


    
        
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                sudo pacman -S --needed git base-devel && git clone https://aur.archlinux.org/yay.git && cd yay && makepkg -si
            
                    
    
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b. Install r-bsgenome.hsapiens.ucsc.hg38 on Arch using YAY


    
        
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                yay -S
            
                        
                r-bsgenome.hsapiens.ucsc.hg38
            
                    
    
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* (Optional) Uninstall r-bsgenome.hsapiens.ucsc.hg38 on Arch using YAY


    
        
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                yay -Rns
            
                        
                r-bsgenome.hsapiens.ucsc.hg38
            
                    
    
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2. Manually Install "r-bsgenome.hsapiens.ucsc.hg38" via AUR

a. Ensure you have the base development tools and git installed with:


    
        
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                sudo pacman -S --needed
            
                        
                base-devel git
            
                    
    
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b. Clone r-bsgenome.hsapiens.ucsc.hg38's git locally


    
        
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                git clone https://aur.archlinux.org/r-bsgenome.hsapiens.ucsc.hg38.git 
            
                        
                ~/r-bsgenome.hsapiens.ucsc.hg38
            
                    
    
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c. Go to ~/r-bsgenome.hsapiens.ucsc.hg38 folder and install it


   
    
        
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                cd
            
                        
                ~/r-bsgenome.hsapiens.ucsc.hg38
            
                    
    
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                makepkg -si
            
                    
    
    Copied

3. Information about the r-bsgenome.hsapiens.ucsc.hg38 package on Arch User Repository (AUR)

ID: 1208844
Name: r-bsgenome.hsapiens.ucsc.hg38
PackageBaseID: 179802
PackageBase: r-bsgenome.hsapiens.ucsc.hg38
Version: 1.4.5-3
Description: Full genome sequences for Homo sapiens (UCSC version hg38, based on GRCh38.p13)
URL: https://bioconductor.org/packages/BSgenome.Hsapiens.UCSC.hg38
NumVotes: 0
Popularity: 0
OutOfDate:
Maintainer: BioArchLinuxBot
Submitter: BioArchLinuxBot
FirstSubmitted: 1654464542
LastModified: 1675967139
URLPath: /cgit/aur.git/snapshot/r-bsgenome.hsapiens.ucsc.hg38.tar.gz