r-bsgenome.mmusculus.ucsc.mm10 on AUR (Arch User Repository)

Last updated: October 07,2024

1. Install "r-bsgenome.mmusculus.ucsc.mm10" effortlessly via AUR with the help of a helper(YAY)

a. Install YAY (https://github.com/Jguer/yay)


    
        
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                sudo pacman -S --needed git base-devel && git clone https://aur.archlinux.org/yay.git && cd yay && makepkg -si
            
                    
    
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b. Install r-bsgenome.mmusculus.ucsc.mm10 on Arch using YAY


    
        
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                yay -S
            
                        
                r-bsgenome.mmusculus.ucsc.mm10
            
                    
    
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* (Optional) Uninstall r-bsgenome.mmusculus.ucsc.mm10 on Arch using YAY


    
        
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                yay -Rns
            
                        
                r-bsgenome.mmusculus.ucsc.mm10
            
                    
    
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2. Manually Install "r-bsgenome.mmusculus.ucsc.mm10" via AUR

a. Ensure you have the base development tools and git installed with:


    
        
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                sudo pacman -S --needed
            
                        
                base-devel git
            
                    
    
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b. Clone r-bsgenome.mmusculus.ucsc.mm10's git locally


    
        
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                git clone https://aur.archlinux.org/r-bsgenome.mmusculus.ucsc.mm10.git 
            
                        
                ~/r-bsgenome.mmusculus.ucsc.mm10
            
                    
    
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c. Go to ~/r-bsgenome.mmusculus.ucsc.mm10 folder and install it


   
    
        
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                cd
            
                        
                ~/r-bsgenome.mmusculus.ucsc.mm10
            
                    
    
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            $
        

        
            
                makepkg -si
            
                    
    
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3. Information about the r-bsgenome.mmusculus.ucsc.mm10 package on Arch User Repository (AUR)

ID: 1090895
Name: r-bsgenome.mmusculus.ucsc.mm10
PackageBaseID: 179803
PackageBase: r-bsgenome.mmusculus.ucsc.mm10
Version: 1.4.3-4
Description: Full genome sequences for Mus musculus (UCSC version mm10, based on GRCm38.p6)
URL: https://bioconductor.org/packages/BSgenome.Mmusculus.UCSC.mm10
NumVotes: 0
Popularity: 0
OutOfDate:
Maintainer: BioArchLinuxBot
Submitter: BioArchLinuxBot
FirstSubmitted: 1654464566
LastModified: 1654464566
URLPath: /cgit/aur.git/snapshot/r-bsgenome.mmusculus.ucsc.mm10.tar.gz