r-casper on AUR (Arch User Repository)

Last updated: January 12,2025

1. Install "r-casper" effortlessly via AUR with the help of a helper(YAY)

a. Install YAY (https://github.com/Jguer/yay)


    
        
            $
        

        
            
                sudo pacman -S --needed git base-devel && git clone https://aur.archlinux.org/yay.git && cd yay && makepkg -si
            
                    
    
    Copied

b. Install r-casper on Arch using YAY

* (Optional) Uninstall r-casper on Arch using YAY

2. Manually Install "r-casper" via AUR

a. Ensure you have the base development tools and git installed with:


    
        
            $
        

        
            
                sudo pacman -S --needed
            
                        
                base-devel git
            
                    
    
    Copied

b. Clone r-casper's git locally


    
        
            $
        

        
            
                git clone https://aur.archlinux.org/r-casper.git 
            
                        
                ~/r-casper
            
                    
    
    Copied

c. Go to ~/r-casper folder and install it


   
    
        
            $
        

        
            
                cd
            
                        
                ~/r-casper
            
                    
    
    Copied

    

   
    
        
            $
        

        
            
                makepkg -si
            
                    
    
    Copied

3. Information about the r-casper package on Arch User Repository (AUR)

ID: 1342504
Name: r-casper
PackageBaseID: 179843
PackageBase: r-casper
Version: 2.36.0-1
Description: Characterization of Alternative Splicing based on Paired-End Reads
URL: https://bioconductor.org/packages/casper
NumVotes: 0
Popularity: 0
OutOfDate:
Maintainer: BioArchLinuxBot
Submitter: BioArchLinuxBot
FirstSubmitted: 1654465547
LastModified: 1698402535
URLPath: /cgit/aur.git/snapshot/r-casper.tar.gz