r-chipxpress on AUR (Arch User Repository)

Last updated: October 08,2024

1. Install "r-chipxpress" effortlessly via AUR with the help of a helper(YAY)

a. Install YAY (https://github.com/Jguer/yay)


    
        
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                sudo pacman -S --needed git base-devel && git clone https://aur.archlinux.org/yay.git && cd yay && makepkg -si
            
                    
    
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b. Install r-chipxpress on Arch using YAY


    
        
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                yay -S
            
                        
                r-chipxpress
            
                    
    
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* (Optional) Uninstall r-chipxpress on Arch using YAY


    
        
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                yay -Rns
            
                        
                r-chipxpress
            
                    
    
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2. Manually Install "r-chipxpress" via AUR

a. Ensure you have the base development tools and git installed with:


    
        
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                sudo pacman -S --needed
            
                        
                base-devel git
            
                    
    
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b. Clone r-chipxpress's git locally


    
        
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                git clone https://aur.archlinux.org/r-chipxpress.git 
            
                        
                ~/r-chipxpress
            
                    
    
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c. Go to ~/r-chipxpress folder and install it


   
    
        
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                cd
            
                        
                ~/r-chipxpress
            
                    
    
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                makepkg -si
            
                    
    
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3. Information about the r-chipxpress package on Arch User Repository (AUR)

ID: 1342672
Name: r-chipxpress
PackageBaseID: 179922
PackageBase: r-chipxpress
Version: 1.46.0-1
Description: ChIPXpress: enhanced transcription factor target gene identification from ChIP-seq and ChIP-chip data using publicly available gene expression profiles
URL: https://bioconductor.org/packages/ChIPXpress
NumVotes: 0
Popularity: 0
OutOfDate:
Maintainer: BioArchLinuxBot
Submitter: BioArchLinuxBot
FirstSubmitted: 1654467375
LastModified: 1698407664
URLPath: /cgit/aur.git/snapshot/r-chipxpress.tar.gz