r-demixt on AUR (Arch User Repository)

Last updated: January 16,2025

1. Install "r-demixt" effortlessly via AUR with the help of a helper(YAY)

a. Install YAY (https://github.com/Jguer/yay)


    
        
            $
        

        
            
                sudo pacman -S --needed git base-devel && git clone https://aur.archlinux.org/yay.git && cd yay && makepkg -si
            
                    
    
    Copied

b. Install r-demixt on Arch using YAY

* (Optional) Uninstall r-demixt on Arch using YAY

2. Manually Install "r-demixt" via AUR

a. Ensure you have the base development tools and git installed with:


    
        
            $
        

        
            
                sudo pacman -S --needed
            
                        
                base-devel git
            
                    
    
    Copied

b. Clone r-demixt's git locally


    
        
            $
        

        
            
                git clone https://aur.archlinux.org/r-demixt.git 
            
                        
                ~/r-demixt
            
                    
    
    Copied

c. Go to ~/r-demixt folder and install it


   
    
        
            $
        

        
            
                cd
            
                        
                ~/r-demixt
            
                    
    
    Copied

    

   
    
        
            $
        

        
            
                makepkg -si
            
                    
    
    Copied

3. Information about the r-demixt package on Arch User Repository (AUR)

ID: 1384862
Name: r-demixt
PackageBaseID: 180172
PackageBase: r-demixt
Version: 1.18.0-1
Description: Cell type-specific deconvolution of heterogeneous tumor samples with two or three components using expression data from RNAseq or microarray platforms
URL: https://bioconductor.org/packages/DeMixT
NumVotes: 0
Popularity: 0
OutOfDate:
Maintainer: BioArchLinuxBot
Submitter: BioArchLinuxBot
FirstSubmitted: 1654473263
LastModified: 1705104387
URLPath: /cgit/aur.git/snapshot/r-demixt.tar.gz