r-granie on AUR (Arch User Repository)

Last updated: November 27,2024

1. Install "r-granie" effortlessly via AUR with the help of a helper(YAY)

a. Install YAY (https://github.com/Jguer/yay)


    
        
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                sudo pacman -S --needed git base-devel && git clone https://aur.archlinux.org/yay.git && cd yay && makepkg -si
            
                    
    
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b. Install r-granie on Arch using YAY

* (Optional) Uninstall r-granie on Arch using YAY

2. Manually Install "r-granie" via AUR

a. Ensure you have the base development tools and git installed with:


    
        
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                sudo pacman -S --needed
            
                        
                base-devel git
            
                    
    
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b. Clone r-granie's git locally


    
        
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                git clone https://aur.archlinux.org/r-granie.git 
            
                        
                ~/r-granie
            
                    
    
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c. Go to ~/r-granie folder and install it


   
    
        
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                cd
            
                        
                ~/r-granie
            
                    
    
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                makepkg -si
            
                    
    
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3. Information about the r-granie package on Arch User Repository (AUR)

ID: 1370276
Name: r-granie
PackageBaseID: 200428
PackageBase: r-granie
Version: 1.6.1-3
Description: Reconstruction cell type specific gene regulatory networks including enhancers using chromatin accessibility and RNA-seq data
URL: https://bioconductor.org/packages/GRaNIE
NumVotes: 0
Popularity: 0
OutOfDate:
Maintainer: pekkarr
Submitter: pekkarr
FirstSubmitted: 1702207675
LastModified: 1702644600
URLPath: /cgit/aur.git/snapshot/r-granie.tar.gz