r-infercnv on AUR (Arch User Repository)

Last updated: October 06,2024

1. Install "r-infercnv" effortlessly via AUR with the help of a helper(YAY)

a. Install YAY (https://github.com/Jguer/yay)

$ sudo pacman -S --needed git base-devel && git clone https://aur.archlinux.org/yay.git && cd yay && makepkg -si

b. Install r-infercnv on Arch using YAY

$ yay -S r-infercnv

* (Optional) Uninstall r-infercnv on Arch using YAY

$ yay -Rns r-infercnv

2. Manually Install "r-infercnv" via AUR

a. Ensure you have the base development tools and git installed with:

$ sudo pacman -S --needed base-devel git

b. Clone r-infercnv's git locally

$ git clone https://aur.archlinux.org/r-infercnv.git ~/r-infercnv

c. Go to ~/r-infercnv folder and install it

$ cd ~/r-infercnv $ makepkg -si

3. Information about the r-infercnv package on Arch User Repository (AUR)

ID: 1363654
Name: r-infercnv
PackageBaseID: 180934
PackageBase: r-infercnv
Version: 1.18.1-1
Description: Infer Copy Number Variation from Single-Cell RNA-Seq Data
URL: https://bioconductor.org/packages/infercnv
NumVotes: 0
Popularity: 0
OutOfDate:
Maintainer: BioArchLinuxBot
Submitter: BioArchLinuxBot
FirstSubmitted: 1654491377
LastModified: 1701562500
URLPath: /cgit/aur.git/snapshot/r-infercnv.tar.gz