r-phenotest on AUR (Arch User Repository)

Last updated: May 18,2024

1. Install "r-phenotest" effortlessly via AUR with the help of a helper(YAY)

a. Install YAY (https://github.com/Jguer/yay)


    
        
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                sudo pacman -S --needed git base-devel && git clone https://aur.archlinux.org/yay.git && cd yay && makepkg -si
            
                    
    
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b. Install r-phenotest on Arch using YAY


    
        
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                yay -S
            
                        
                r-phenotest
            
                    
    
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* (Optional) Uninstall r-phenotest on Arch using YAY


    
        
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                yay -Rns
            
                        
                r-phenotest
            
                    
    
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2. Manually Install "r-phenotest" via AUR

a. Ensure you have the base development tools and git installed with:


    
        
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                sudo pacman -S --needed
            
                        
                base-devel git
            
                    
    
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b. Clone r-phenotest's git locally


    
        
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                git clone https://aur.archlinux.org/r-phenotest.git 
            
                        
                ~/r-phenotest
            
                    
    
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c. Go to ~/r-phenotest folder and install it


   
    
        
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                cd
            
                        
                ~/r-phenotest
            
                    
    
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                makepkg -si
            
                    
    
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3. Information about the r-phenotest package on Arch User Repository (AUR)

ID: 1341170
Name: r-phenotest
PackageBaseID: 181734
PackageBase: r-phenotest
Version: 1.50.0-1
Description: Tools to test association between gene expression and phenotype in a way that is efficient, structured, fast and scalable. We also provide tools to do GSEA (Gene set enrichment analysis) and copy number variation.
URL: https://bioconductor.org/packages/phenoTest
NumVotes: 0
Popularity: 0
OutOfDate:
Maintainer: BioArchLinuxBot
Submitter: BioArchLinuxBot
FirstSubmitted: 1654511011
LastModified: 1698302718
URLPath: /cgit/aur.git/snapshot/r-phenotest.tar.gz