r-rsamtools on AUR (Arch User Repository)

Last updated: May 04,2024

1. Install "r-rsamtools" effortlessly via AUR with the help of a helper(YAY)

a. Install YAY (https://github.com/Jguer/yay)


    
        
            $
        

        
            
                sudo pacman -S --needed git base-devel && git clone https://aur.archlinux.org/yay.git && cd yay && makepkg -si
            
                    
    
    Copied

b. Install r-rsamtools on Arch using YAY


    
        
            $
        

        
            
                yay -S
            
                        
                r-rsamtools
            
                    
    
    Copied

* (Optional) Uninstall r-rsamtools on Arch using YAY


    
        
            $
        

        
            
                yay -Rns
            
                        
                r-rsamtools
            
                    
    
    Copied

2. Manually Install "r-rsamtools" via AUR

a. Ensure you have the base development tools and git installed with:


    
        
            $
        

        
            
                sudo pacman -S --needed
            
                        
                base-devel git
            
                    
    
    Copied

b. Clone r-rsamtools's git locally


    
        
            $
        

        
            
                git clone https://aur.archlinux.org/r-rsamtools.git 
            
                        
                ~/r-rsamtools
            
                    
    
    Copied

c. Go to ~/r-rsamtools folder and install it


   
    
        
            $
        

        
            
                cd
            
                        
                ~/r-rsamtools
            
                    
    
    Copied

    

   
    
        
            $
        

        
            
                makepkg -si
            
                    
    
    Copied

3. Information about the r-rsamtools package on Arch User Repository (AUR)

ID: 1346261
Name: r-rsamtools
PackageBaseID: 139505
PackageBase: r-rsamtools
Version: 2.18.0-1
Description: Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import
URL: https://bioconductor.org/packages/release/bioc/html/Rsamtools.html
NumVotes: 0
Popularity: 0
OutOfDate:
Maintainer: greyltc
Submitter: greyltc
FirstSubmitted: 1549722947
LastModified: 1698922787
URLPath: /cgit/aur.git/snapshot/r-rsamtools.tar.gz