r-sctgif on AUR (Arch User Repository)

Last updated: November 27,2024

1. Install "r-sctgif" effortlessly via AUR with the help of a helper(YAY)

a. Install YAY (https://github.com/Jguer/yay)


    
        
            $
        

        
            
                sudo pacman -S --needed git base-devel && git clone https://aur.archlinux.org/yay.git && cd yay && makepkg -si
            
                    
    
    Copied

b. Install r-sctgif on Arch using YAY

* (Optional) Uninstall r-sctgif on Arch using YAY

2. Manually Install "r-sctgif" via AUR

a. Ensure you have the base development tools and git installed with:


    
        
            $
        

        
            
                sudo pacman -S --needed
            
                        
                base-devel git
            
                    
    
    Copied

b. Clone r-sctgif's git locally


    
        
            $
        

        
            
                git clone https://aur.archlinux.org/r-sctgif.git 
            
                        
                ~/r-sctgif
            
                    
    
    Copied

c. Go to ~/r-sctgif folder and install it


   
    
        
            $
        

        
            
                cd
            
                        
                ~/r-sctgif
            
                    
    
    Copied

    

   
    
        
            $
        

        
            
                makepkg -si
            
                    
    
    Copied

3. Information about the r-sctgif package on Arch User Repository (AUR)

ID: 1345405
Name: r-sctgif
PackageBaseID: 182321
PackageBase: r-sctgif
Version: 1.16.0-1
Description: Cell type annotation for unannotated single-cell RNA-Seq data
URL: https://bioconductor.org/packages/scTGIF
NumVotes: 0
Popularity: 0
OutOfDate:
Maintainer: BioArchLinuxBot
Submitter: BioArchLinuxBot
FirstSubmitted: 1654525676
LastModified: 1698778935
URLPath: /cgit/aur.git/snapshot/r-sctgif.tar.gz