r-seq2pathway on AUR (Arch User Repository)

Last updated: October 08,2024

1. Install "r-seq2pathway" effortlessly via AUR with the help of a helper(YAY)

a. Install YAY (https://github.com/Jguer/yay)


    
        
            $
        

        
            
                sudo pacman -S --needed git base-devel && git clone https://aur.archlinux.org/yay.git && cd yay && makepkg -si
            
                    
    
    Copied

b. Install r-seq2pathway on Arch using YAY


    
        
            $
        

        
            
                yay -S
            
                        
                r-seq2pathway
            
                    
    
    Copied

* (Optional) Uninstall r-seq2pathway on Arch using YAY


    
        
            $
        

        
            
                yay -Rns
            
                        
                r-seq2pathway
            
                    
    
    Copied

2. Manually Install "r-seq2pathway" via AUR

a. Ensure you have the base development tools and git installed with:


    
        
            $
        

        
            
                sudo pacman -S --needed
            
                        
                base-devel git
            
                    
    
    Copied

b. Clone r-seq2pathway's git locally


    
        
            $
        

        
            
                git clone https://aur.archlinux.org/r-seq2pathway.git 
            
                        
                ~/r-seq2pathway
            
                    
    
    Copied

c. Go to ~/r-seq2pathway folder and install it


   
    
        
            $
        

        
            
                cd
            
                        
                ~/r-seq2pathway
            
                    
    
    Copied

    

   
    
        
            $
        

        
            
                makepkg -si
            
                    
    
    Copied

3. Information about the r-seq2pathway package on Arch User Repository (AUR)

ID: 1340994
Name: r-seq2pathway
PackageBaseID: 182340
PackageBase: r-seq2pathway
Version: 1.34.0-1
Description: a novel tool for functional gene-set (or termed as pathway) analysis of next-generation sequencing data
URL: https://bioconductor.org/packages/seq2pathway
NumVotes: 0
Popularity: 0
OutOfDate:
Maintainer: BioArchLinuxBot
Submitter: BioArchLinuxBot
FirstSubmitted: 1654526186
LastModified: 1698296174
URLPath: /cgit/aur.git/snapshot/r-seq2pathway.tar.gz