r-shortread on AUR (Arch User Repository)

Last updated: November 23,2024

1. Install "r-shortread" effortlessly via AUR with the help of a helper(YAY)

a. Install YAY (https://github.com/Jguer/yay)


    
        
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                sudo pacman -S --needed git base-devel && git clone https://aur.archlinux.org/yay.git && cd yay && makepkg -si
            
                    
    
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b. Install r-shortread on Arch using YAY


    
        
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                yay -S
            
                        
                r-shortread
            
                    
    
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* (Optional) Uninstall r-shortread on Arch using YAY


    
        
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                yay -Rns
            
                        
                r-shortread
            
                    
    
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2. Manually Install "r-shortread" via AUR

a. Ensure you have the base development tools and git installed with:


    
        
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                sudo pacman -S --needed
            
                        
                base-devel git
            
                    
    
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b. Clone r-shortread's git locally


    
        
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                git clone https://aur.archlinux.org/r-shortread.git 
            
                        
                ~/r-shortread
            
                    
    
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c. Go to ~/r-shortread folder and install it


   
    
        
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                cd
            
                        
                ~/r-shortread
            
                    
    
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                makepkg -si
            
                    
    
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3. Information about the r-shortread package on Arch User Repository (AUR)

ID: 1346271
Name: r-shortread
PackageBaseID: 139512
PackageBase: r-shortread
Version: 1.60.0-1
Description: FASTQ input and manipulation
URL: https://bioconductor.org/packages/release/bioc/html/ShortRead.html
NumVotes: 0
Popularity: 0
OutOfDate:
Maintainer: greyltc
Submitter: greyltc
FirstSubmitted: 1549724619
LastModified: 1698923757
URLPath: /cgit/aur.git/snapshot/r-shortread.tar.gz