r-txdb.mmusculus.ucsc.mm9.knowngene on AUR (Arch User Repository)

Last updated: November 24,2024

1. Install "r-txdb.mmusculus.ucsc.mm9.knowngene" effortlessly via AUR with the help of a helper(YAY)

a. Install YAY (https://github.com/Jguer/yay)


    
        
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                sudo pacman -S --needed git base-devel && git clone https://aur.archlinux.org/yay.git && cd yay && makepkg -si
            
                    
    
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b. Install r-txdb.mmusculus.ucsc.mm9.knowngene on Arch using YAY


    
        
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                yay -S
            
                        
                r-txdb.mmusculus.ucsc.mm9.knowngene
            
                    
    
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* (Optional) Uninstall r-txdb.mmusculus.ucsc.mm9.knowngene on Arch using YAY


    
        
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                yay -Rns
            
                        
                r-txdb.mmusculus.ucsc.mm9.knowngene
            
                    
    
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2. Manually Install "r-txdb.mmusculus.ucsc.mm9.knowngene" via AUR

a. Ensure you have the base development tools and git installed with:


    
        
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                sudo pacman -S --needed
            
                        
                base-devel git
            
                    
    
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b. Clone r-txdb.mmusculus.ucsc.mm9.knowngene's git locally


    
        
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                git clone https://aur.archlinux.org/r-txdb.mmusculus.ucsc.mm9.knowngene.git 
            
                        
                ~/r-txdb.mmusculus.ucsc.mm9.knowngene
            
                    
    
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c. Go to ~/r-txdb.mmusculus.ucsc.mm9.knowngene folder and install it


   
    
        
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                cd
            
                        
                ~/r-txdb.mmusculus.ucsc.mm9.knowngene
            
                    
    
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            $
        

        
            
                makepkg -si
            
                    
    
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3. Information about the r-txdb.mmusculus.ucsc.mm9.knowngene package on Arch User Repository (AUR)

ID: 1094439
Name: r-txdb.mmusculus.ucsc.mm9.knowngene
PackageBaseID: 182808
PackageBase: r-txdb.mmusculus.ucsc.mm9.knowngene
Version: 3.2.2-4
Description: Annotation package for TxDb object(s)
URL: https://bioconductor.org/packages/TxDb.Mmusculus.UCSC.mm9.knownGene
NumVotes: 0
Popularity: 0
OutOfDate:
Maintainer: BioArchLinuxBot
Submitter: BioArchLinuxBot
FirstSubmitted: 1654539515
LastModified: 1654539515
URLPath: /cgit/aur.git/snapshot/r-txdb.mmusculus.ucsc.mm9.knowngene.tar.gz