rsem on AUR (Arch User Repository)

Last updated: May 18,2024

1. Install "rsem" effortlessly via AUR with the help of a helper(YAY)

a. Install YAY (https://github.com/Jguer/yay)


    
        
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                sudo pacman -S --needed git base-devel && git clone https://aur.archlinux.org/yay.git && cd yay && makepkg -si
            
                    
    
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b. Install rsem on Arch using YAY

* (Optional) Uninstall rsem on Arch using YAY

2. Manually Install "rsem" via AUR

a. Ensure you have the base development tools and git installed with:


    
        
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                sudo pacman -S --needed
            
                        
                base-devel git
            
                    
    
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b. Clone rsem's git locally


    
        
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                git clone https://aur.archlinux.org/rsem.git 
            
                        
                ~/rsem
            
                    
    
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c. Go to ~/rsem folder and install it


   
    
        
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                cd
            
                        
                ~/rsem
            
                    
    
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                makepkg -si
            
                    
    
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3. Information about the rsem package on Arch User Repository (AUR)

ID: 812069
Name: rsem
PackageBaseID: 91433
PackageBase: rsem
Version: 1.3.3-1
Description: accurate quantification of gene and isoform expression from RNA-Seq data
URL: http://deweylab.biostat.wisc.edu/rsem/
NumVotes: 3
Popularity: 0
OutOfDate:
Maintainer: greyltc
Submitter: greyltc
FirstSubmitted: 1426676315
LastModified: 1604238771
URLPath: /cgit/aur.git/snapshot/rsem.tar.gz