samtools-git on AUR (Arch User Repository)

Last updated: November 24,2024

1. Install "samtools-git" effortlessly via AUR with the help of a helper(YAY)

a. Install YAY (https://github.com/Jguer/yay)


    
        
            $
        

        
            
                sudo pacman -S --needed git base-devel && git clone https://aur.archlinux.org/yay.git && cd yay && makepkg -si
            
                    
    
    Copied

b. Install samtools-git on Arch using YAY


    
        
            $
        

        
            
                yay -S
            
                        
                samtools-git
            
                    
    
    Copied

* (Optional) Uninstall samtools-git on Arch using YAY


    
        
            $
        

        
            
                yay -Rns
            
                        
                samtools-git
            
                    
    
    Copied

2. Manually Install "samtools-git" via AUR

a. Ensure you have the base development tools and git installed with:


    
        
            $
        

        
            
                sudo pacman -S --needed
            
                        
                base-devel git
            
                    
    
    Copied

b. Clone samtools-git's git locally


    
        
            $
        

        
            
                git clone https://aur.archlinux.org/samtools-git.git 
            
                        
                ~/samtools-git
            
                    
    
    Copied

c. Go to ~/samtools-git folder and install it


   
    
        
            $
        

        
            
                cd
            
                        
                ~/samtools-git
            
                    
    
    Copied

    

   
    
        
            $
        

        
            
                makepkg -si
            
                    
    
    Copied

3. Information about the samtools-git package on Arch User Repository (AUR)

ID: 1240797
Name: samtools-git
PackageBaseID: 157270
PackageBase: samtools-git
Version: 1.17.r8.gc75edb00-1
Description: Tools for manipulating next-generation sequencing data
URL: https://www.htslib.org/
NumVotes: 0
Popularity: 0
OutOfDate:
Maintainer: Chocobo1
Submitter: Chocobo1
FirstSubmitted: 1598948047
LastModified: 1681374839
URLPath: /cgit/aur.git/snapshot/samtools-git.tar.gz