star-cshl on AUR (Arch User Repository)

Last updated: July 07,2024

1. Install "star-cshl" effortlessly via AUR with the help of a helper(YAY)

a. Install YAY (https://github.com/Jguer/yay)


    
        
            $
        

        
            
                sudo pacman -S --needed git base-devel && git clone https://aur.archlinux.org/yay.git && cd yay && makepkg -si
            
                    
    
    Copied

b. Install star-cshl on Arch using YAY

* (Optional) Uninstall star-cshl on Arch using YAY

2. Manually Install "star-cshl" via AUR

a. Ensure you have the base development tools and git installed with:


    
        
            $
        

        
            
                sudo pacman -S --needed
            
                        
                base-devel git
            
                    
    
    Copied

b. Clone star-cshl's git locally


    
        
            $
        

        
            
                git clone https://aur.archlinux.org/star-cshl.git 
            
                        
                ~/star-cshl
            
                    
    
    Copied

c. Go to ~/star-cshl folder and install it


   
    
        
            $
        

        
            
                cd
            
                        
                ~/star-cshl
            
                    
    
    Copied

    

   
    
        
            $
        

        
            
                makepkg -si
            
                    
    
    Copied

3. Information about the star-cshl package on Arch User Repository (AUR)

ID: 1422809
Name: star-cshl
PackageBaseID: 81008
PackageBase: star-cshl
Version: 2.7.11b-1
Description: STAR aligns RNA-seq reads to a reference genome using uncompressed suffix arrays
URL: https://github.com/alexdobin/STAR
NumVotes: 6
Popularity: 0
OutOfDate:
Maintainer: vejnar
Submitter: vejnar
FirstSubmitted: 1397691055
LastModified: 1709855413
URLPath: /cgit/aur.git/snapshot/star-cshl.tar.gz