How to Install and Uninstall abpoa Package on Kali Linux

Last updated: September 28,2024

1. Install "abpoa" package

This is a short guide on how to install abpoa on Kali Linux


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                abpoa
            
                    
    
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2. Uninstall "abpoa" package

This guide covers the steps necessary to uninstall abpoa on Kali Linux:


    
        
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                sudo apt remove
            
                        
                abpoa
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the abpoa package on Kali Linux

Package: abpoa
Version: 1.5.1-1
Installed-Size: 1572
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: libc6 (>= 2.34), zlib1g (>= 1:1.1.4), graphviz
Size: 274408
SHA256: 35dce6d75e6ec7ff1e473f0457ee95a6d34c15d4ae32cf2ef41b3dc52294fd10
SHA1: 17d5c882519ed6ae4826d1801bddceca8690c69c
MD5sum: e29f3f4ab7e63a6030c56847373e68d3
Description: adaptive banded Partial Order Alignment
abPOA is an extended version of Partial Order Alignment (POA) that performs
adaptive banded dynamic programming (DP) with an SIMD implementation. abPOA
can perform multiple sequence alignment (MSA) on a set of input sequences and
generate a consensus sequence by applying the heaviest bundling algorithm to
the final alignment graph.
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abPOA can generate high-quality consensus sequences from error-prone long
reads and offer significant speed improvement over existing tools.
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abPOA supports three alignment modes (global, local, extension) and flexible
scoring schemes that allow linear, affine and convex gap penalties. It right
now supports SSE2/SSE4.1/AVX2 vectorization.
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For more information please refer to the paper[1] published in Bioinformatics.
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[1]: https://dx.doi.org/10.1093/bioinformatics/btaa963
Description-md5:
Homepage: https://github.com/yangao07/abPOA
Built-Using: simde (= 0.7.6-1)
Section: science
Priority: optional
Filename: pool/main/a/abpoa/abpoa_1.5.1-1_amd64.deb