How to Install and Uninstall any2fasta Package on Kali Linux

Last updated: November 21,2024

1. Install "any2fasta" package

Here is a brief guide to show you how to install any2fasta on Kali Linux


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                any2fasta
            
                    
    
    Copied

2. Uninstall "any2fasta" package

In this section, we are going to explain the necessary steps to uninstall any2fasta on Kali Linux:


    
        
            $
        

        
            
                sudo apt remove
            
                        
                any2fasta
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the any2fasta package on Kali Linux

Package: any2fasta
Version: 0.4.2-2
Installed-Size: 21
Maintainer: Debian Med Packaging Team
Architecture: all
Depends: perl:any
Size: 6232
SHA256: 5d5a205de7ba5317232647d833a1354bc6d3d60228545dcf3fe593be7a3abc76
SHA1: 6d7a71254d0bfc9ae4102f6e7fa54ea8edc3539d
MD5sum: 9a2df426c4db65c95b88f1b3c17b4c2f
Description: convert various sequence formats to FASTA
Established tools like readseq and seqret from EMBOSS, both create mangled
IDs containing | or . characters, and there is no way to fix this behaviour.
This resultes in inconsitences between .gbk and .fna versions of files in
pipelines.
.
This script uses only core Perl modules, has no other dependencies like
Bioperl or Biopython, and runs very quickly.
.
It supports the following input formats:
.
1. Genbank flat file, typically .gb, .gbk, .gbff (starts with LOCUS)
2. EMBL flat file, typically .embl, (starts with ID)
3. GFF with sequence, typically .gff, .gff3 (starts with ##gff)
4. FASTA DNA, typically .fasta, .fa, .fna, .ffn (starts with >)
5. FASTQ DNA, typically .fastq, .fq (starts with @)
6. CLUSTAL alignments, typically .clw, .clu (starts with CLUSTAL or MUSCLE)
7. STOCKHOLM alignments, typically .sth (starts with # STOCKHOLM)
8. GFA assembly graph, typically .gfa (starts with ^[A-Z]\t)
.
Files may be compressed with:
.
1. gzip, typically .gz
2. bzip2, typically .bz2
3. zip, typically .zip
Description-md5:
Multi-Arch: foreign
Homepage: https://github.com/tseemann/any2fasta
Section: science
Priority: optional
Filename: pool/main/a/any2fasta/any2fasta_0.4.2-2_all.deb