How to Install and Uninstall bamclipper Package on Kali Linux

Last updated: May 21,2024

1. Install "bamclipper" package

This is a short guide on how to install bamclipper on Kali Linux


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                bamclipper
            
                    
    
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2. Uninstall "bamclipper" package

In this section, we are going to explain the necessary steps to uninstall bamclipper on Kali Linux:


    
        
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                sudo apt remove
            
                        
                bamclipper
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the bamclipper package on Kali Linux

Package: bamclipper
Version: 1.0.0-3
Installed-Size: 30
Maintainer: Debian Med Packaging Team
Architecture: all
Depends: perl:any, samtools, parallel
Size: 6436
SHA256: b718277d9a48679cd796affea29648d33d69154563f734c09d765784910b8146
SHA1: b16c8f2c29eaaa9199b76db800f243c88de84f00
MD5sum: 18ebbdc3942f00ea66fcd459138b08b2
Description: Remove gene-specific primer sequences from SAM/BAM alignments
Remove gene-specific primer sequences from SAM/BAM alignments of PCR
amplicons by soft-clipping.
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bamclipper.sh soft-clips gene-specific primers from BAM alignment file based
on genomic coordinates of primer pairs in BEDPE format.
Description-md5:
Homepage: https://github.com/tommyau/bamclipper
Section: science
Priority: optional
Filename: pool/main/b/bamclipper/bamclipper_1.0.0-3_all.deb