How to Install and Uninstall cutesv Package on Kali Linux

Last updated: May 13,2024

Deprecated! Installation of this package may no longer be supported.

1. Install "cutesv" package

In this section, we are going to explain the necessary steps to install cutesv on Kali Linux


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                cutesv
            
                    
    
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2. Uninstall "cutesv" package

This is a short guide on how to uninstall cutesv on Kali Linux:


    
        
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                sudo apt remove
            
                        
                cutesv
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the cutesv package on Kali Linux

Package: cutesv
Version: 2.1.0-2
Installed-Size: 222
Maintainer: Debian Med Packaging Team
Architecture: all
Depends: python3-biopython, python3-cigar, python3-numpy, python3-pysam, python3-scipy, python3-sklearn, python3-vcf, python3:any
Size: 36872
SHA256: a2763c15d8db22f795aa5739351fe04959c5045e26cd06bdbb6610558a4c0777
SHA1: 36cf879fe7bf6c40333992af3612fe81587182ff
MD5sum: 151d9c85cee35c8ad2cc29047ee88d8d
Description: comprehensive discovery of structural variations of genomic sequences
Long-read sequencing enables the comprehensive discovery of structural
variations (SVs). However, it is still non-trivial to achieve high
sensitivity and performance simultaneously due to the complex SV
characteristics implied by noisy long reads.
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cuteSV is a sensitive, fast and scalable long-read-based SV detection
approach. cuteSV uses tailored methods to collect the signatures of
various types of SVs and employs a clustering-and-refinement method to
analyze the signatures to implement sensitive SV detection. Benchmarks
on real Pacific Biosciences (PacBio) and Oxford Nanopore Technology
(ONT) datasets demonstrate that cuteSV has better yields and scalability
than state-of-the-art tools.
Description-md5:
Homepage: https://github.com/tjiangHIT/cuteSV
Section: science
Priority: optional
Filename: pool/main/c/cutesv/cutesv_2.1.0-2_all.deb