How to Install and Uninstall libsnpsift-java Package on Kali Linux

Last updated: May 19,2024

1. Install "libsnpsift-java" package

Please follow the step by step instructions below to install libsnpsift-java on Kali Linux


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                libsnpsift-java
            
                    
    
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2. Uninstall "libsnpsift-java" package

This guide covers the steps necessary to uninstall libsnpsift-java on Kali Linux:


    
        
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                sudo apt remove
            
                        
                libsnpsift-java
            
                    
    
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            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the libsnpsift-java package on Kali Linux

Package: libsnpsift-java
Source: snpsift
Version: 5.1+dfsg2-2
Installed-Size: 341
Maintainer: Debian Med Packaging Team
Architecture: all
Depends: antlr4, libcommons-math3-java (>= 3.6.1), libhtsjdk-java (>= 2.23.0), libsnpeff-java, libtrove3-java
Size: 307736
SHA256: 660c5dec2071409536b6eb9f494d74cb2ef631a50ac9eac4ec3b38901251b31b
SHA1: 84b075ac784e29fad6905a2bb64eda19f9ff1928
MD5sum: 7a49e559010e1f09e6f9f8c78cbfe4d1
Description: tool to annotate and manipulate genome variants - lib
SnpSift is a toolbox that allows one to filter and manipulate annotated files.
Once the genomic variants have been annotated, one needs to filter them out in
order to find the "interesting / relevant variants". Given the large data
files, this is not a trivial task (e.g. one cannot load all the variants into
XLS spreadsheet). SnpSift helps to perform this VCF file manipulation and
filtering required at this stage in data processing pipelines.
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This package contains the library.
Description-md5:
Homepage: https://pcingola.github.io/SnpEff/ss_introduction/
Section: java
Priority: optional
Filename: pool/main/s/snpsift/libsnpsift-java_5.1+dfsg2-2_all.deb