How to Install and Uninstall metaphlan Package on Kali Linux

Last updated: May 20,2024

Deprecated! Installation of this package may no longer be supported.

1. Install "metaphlan" package

In this section, we are going to explain the necessary steps to install metaphlan on Kali Linux


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                metaphlan
            
                    
    
    Copied

2. Uninstall "metaphlan" package

Please follow the guidelines below to uninstall metaphlan on Kali Linux:


    
        
            $
        

        
            
                sudo apt remove
            
                        
                metaphlan
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the metaphlan package on Kali Linux

Package: metaphlan
Version: 4.0.4-1
Installed-Size: 6184
Maintainer: Debian Med Packaging Team
Architecture: all
Replaces: metaphlan2
Provides: metaphlan2
Depends: python3-biom-format, python3-biopython, python3-dendropy, python3-numpy, python3-pandas, python3-pysam, python3-requests, python3-scipy, python3:any, metaphlan2-data, python3-msgpack, bowtie2
Conflicts: metaphlan2
Size: 2010612
SHA256: 14b33661eb4da843facb0c32ed26335ea452204d8046fd079dc03e38c6fd744f
SHA1: 5e2b9778ce192e58ebe2f928be39a592b6dc1322
MD5sum: f318f642ce83ca575e00e4e996050b5a
Description: Metagenomic Phylogenetic Analysis
MetaPhlAn is a computational tool for profiling the composition of
microbial communities (Bacteria, Archaea and Eukaryotes) from
metagenomic shotgun sequencing data (i.e. not 16S) with species-level.
With the newly added StrainPhlAn module, it is now possible to perform
accurate strain-level microbial profiling.
.
MetaPhlAn relies on ~1.1M unique clade-specific marker genes (the latest
marker information file mpa_v31_CHOCOPhlAn_201901_marker_info.txt.bz2
can be found here) identified from ~100,000 reference genomes (~99,500
bacterial and archaeal and ~500 eukaryotic), allowing:
.
* unambiguous taxonomic assignments;
* accurate estimation of organismal relative abundance;
* species-level resolution for bacteria, archaea, eukaryotes and
viruses;
* strain identification and tracking
* orders of magnitude speedups compared to existing methods.
* metagenomic strain-level population genomics
Description-md5:
Homepage: https://github.com/biobakery/MetaPhlAn
Section: science
Priority: optional
Filename: pool/main/m/metaphlan/metaphlan_4.0.4-1_all.deb