How to Install and Uninstall mummer Package on Kali Linux
Last updated: November 06,2024
1. Install "mummer" package
This is a short guide on how to install mummer on Kali Linux
$
sudo apt update
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$
sudo apt install
mummer
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2. Uninstall "mummer" package
Learn how to uninstall mummer on Kali Linux:
$
sudo apt remove
mummer
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$
sudo apt autoclean && sudo apt autoremove
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3. Information about the mummer package on Kali Linux
Package: mummer
Version: 3.23+dfsg-8
Installed-Size: 3307
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.0), libstdc++6 (>= 11), perl:any, gawk
Size: 661672
SHA256: 9d5f8f461331562e6c58f11a37f227c3334918d2f0c5e22e7715d21b7de85d2e
SHA1: d09b640bc3c85b5e9776aa0831824965baef481d
MD5sum: 04af4d909a3cdf81103b7fb7e2e2bf26
Description: Efficient sequence alignment of full genomes
MUMmer is a system for rapidly aligning entire genomes, whether
in complete or draft form. For example, MUMmer 3.0 can find all
20-basepair or longer exact matches between a pair of 5-megabase genomes
in 13.7 seconds, using 78 MB of memory, on a 2.4 GHz Linux desktop
computer. MUMmer can also align incomplete genomes; it handles the 100s
or 1000s of contigs from a shotgun sequencing project with ease, and
will align them to another set of contigs or a genome using the NUCmer
program included with the system. If the species are too divergent for
DNA sequence alignment to detect similarity, then the PROmer program
can generate alignments based upon the six-frame translations of both
input sequences.
Description-md5:
Homepage: https://mummer.sourceforge.net/
Tag: field::biology, field::biology:bioinformatics, implemented-in::c++,
interface::commandline, role::program, scope::utility, use::comparing,
works-with-format::TODO, works-with-format::plaintext, works-with::TODO
Section: science
Priority: optional
Filename: pool/main/m/mummer/mummer_3.23+dfsg-8_amd64.deb
Version: 3.23+dfsg-8
Installed-Size: 3307
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.0), libstdc++6 (>= 11), perl:any, gawk
Size: 661672
SHA256: 9d5f8f461331562e6c58f11a37f227c3334918d2f0c5e22e7715d21b7de85d2e
SHA1: d09b640bc3c85b5e9776aa0831824965baef481d
MD5sum: 04af4d909a3cdf81103b7fb7e2e2bf26
Description: Efficient sequence alignment of full genomes
MUMmer is a system for rapidly aligning entire genomes, whether
in complete or draft form. For example, MUMmer 3.0 can find all
20-basepair or longer exact matches between a pair of 5-megabase genomes
in 13.7 seconds, using 78 MB of memory, on a 2.4 GHz Linux desktop
computer. MUMmer can also align incomplete genomes; it handles the 100s
or 1000s of contigs from a shotgun sequencing project with ease, and
will align them to another set of contigs or a genome using the NUCmer
program included with the system. If the species are too divergent for
DNA sequence alignment to detect similarity, then the PROmer program
can generate alignments based upon the six-frame translations of both
input sequences.
Description-md5:
Homepage: https://mummer.sourceforge.net/
Tag: field::biology, field::biology:bioinformatics, implemented-in::c++,
interface::commandline, role::program, scope::utility, use::comparing,
works-with-format::TODO, works-with-format::plaintext, works-with::TODO
Section: science
Priority: optional
Filename: pool/main/m/mummer/mummer_3.23+dfsg-8_amd64.deb