How to Install and Uninstall parallel-fastq-dump Package on Kali Linux

Last updated: November 23,2024

1. Install "parallel-fastq-dump" package

Please follow the instructions below to install parallel-fastq-dump on Kali Linux


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                parallel-fastq-dump
            
                    
    
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2. Uninstall "parallel-fastq-dump" package

Please follow the guidelines below to uninstall parallel-fastq-dump on Kali Linux:


    
        
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                sudo apt remove
            
                        
                parallel-fastq-dump
            
                    
    
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            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the parallel-fastq-dump package on Kali Linux

Package: parallel-fastq-dump
Version: 0.6.7-3
Installed-Size: 24
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: python3:any, sra-toolkit
Size: 5616
SHA256: 6ba8b32a21be2485b7f02d4ac2ec25291f10256c19b1e2f48d8d6da6cdcdf04f
SHA1: fdc832cba49d19edae9c3436d9aeab31744d30f0
MD5sum: da2dc8c27b50e6a20548a7bbd6851948
Description: parallel fastq-dump wrapper
NCBI fastq-dump can be very slow sometimes, even if you have the resources
(network, IO, CPU) to go faster, even if you already downloaded the sra
file. This tool speeds up the process by dividing the work into multiple
threads.
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This is possible because fastq-dump have options (-N and -X) to query
specific ranges of the sra file, this tool works by dividing the work
into the requested number of threads, running multiple fastq-dump in
parallel and concatenating the results back together, as if you had just
executed a plain fastq-dump call.
Description-md5:
Homepage: https://github.com/rvalieris/parallel-fastq-dump
Section: science
Priority: optional
Filename: pool/main/p/parallel-fastq-dump/parallel-fastq-dump_0.6.7-3_amd64.deb