How to Install and Uninstall python3-pdbfixer Package on Kali Linux

Last updated: December 24,2024

1. Install "python3-pdbfixer" package

This tutorial shows how to install python3-pdbfixer on Kali Linux


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                python3-pdbfixer
            
                    
    
    Copied

2. Uninstall "python3-pdbfixer" package

This is a short guide on how to uninstall python3-pdbfixer on Kali Linux:


    
        
            $
        

        
            
                sudo apt remove
            
                        
                python3-pdbfixer
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the python3-pdbfixer package on Kali Linux

Package: python3-pdbfixer
Source: python-pdbfixer
Version: 1.9-3
Installed-Size: 2411
Maintainer: Debian Python Team
Architecture: all
Depends: python3-numpy, python3-openmm, python3:any
Size: 437700
SHA256: 22d69b9cd0e75f237c30bf3827a12e131664d2410e014ebe94c2ce1fca8cefa9
SHA1: b5d5b58d98d55895bc915e14d95ac0cabec1858a
MD5sum: f2edd9d9cdcbb37e1b4483c4cd678d93
Description: Fix problems in Protein Data Bank files (Python 3)
PDBFixer is an application for fixing problems in Protein Data Bank files in
preparation for simulating them. It can automatically fix the following
problems:
.
- Add missing heavy atoms.
- Add missing hydrogen atoms.
- Build missing loops.
- Convert non-standard residues to their standard equivalents.
- Select a single position for atoms with multiple alternate positions listed.
- Delete unwanted chains from the model.
- Delete unwanted heterogens.
- Build a water box for explicit solvent simulations.
.
This package installs the library for Python 3.
Description-md5:
Homepage: https://github.com/openmm/pdbfixer
Section: python
Priority: optional
Filename: pool/main/p/python-pdbfixer/python3-pdbfixer_1.9-3_all.deb