How to Install and Uninstall rapmap Package on Kali Linux

Last updated: July 06,2024

1. Install "rapmap" package

Learn how to install rapmap on Kali Linux


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                rapmap
            
                    
    
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2. Uninstall "rapmap" package

Please follow the guidance below to uninstall rapmap on Kali Linux:


    
        
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                sudo apt remove
            
                        
                rapmap
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the rapmap package on Kali Linux

Package: rapmap
Source: rapmap (0.15.0+dfsg-3)
Version: 0.15.0+dfsg-3+b3
Installed-Size: 2961
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: libc6 (>= 2.36), libdivsufsort3 (>= 2.0.1), libgcc-s1 (>= 4.2), libjemalloc2 (>= 5.0.0), zlib1g (>= 1:1.1.4)
Size: 842724
SHA256: 8f5445a2f58834c990c3450064672f9e93be07774e141645748e03c4e2a50a9b
SHA1: 50b1391fbafd393cee932a12d437f31b1163f4da
MD5sum: d08494bfd51f849f7798a28f3f19ed0e
Description: rapid sensitive and accurate DNA read mapping via quasi-mapping
RapMap is a testing ground for ideas in quasi-mapping / (lightweight /
pseudo) transcriptome alignment. That means that, at this point, it is
somewhat experimental. The develop branch will have the latest
improvements and additions, but is not guaranteed to be stable between
commits. Breaking changes to the master branch will be accompanied by a
tag to the version before the breaking change. Currently, RapMap is a
stand-alone quasi-mapper that can be used with other tools. It is also
being used as part of Sailfish and Salmon. Eventually, the hope is to
create and stabilize an API so that it can be used as a library from
other tools.
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Quasi-mapping / (lightweight / pseudo)-alignment is the term that is
used here for the type of information required for certain tasks (e.g.
transcript quantification) that is less "heavyweight" than what is
provided by traditional alignment. For example, one may only need to
know the transcripts / contigs to which a read aligns and, perhaps, the
position within those transcripts rather than the optimal alignment and
base-for-base CIGAR string that aligns the read and substring of the
transcript. For details on RapMap (quasi-mapping in particular), please
check out the associated paper. Note: RapMap implements both quasi-
mapping and pseudo-alignment (originally introduced in Bray et al.
2016), these two are not the same thing. They are distinct concepts, and
RapMap simply happens to implement algorithms for computing both.
Description-md5:
Homepage: https://github.com/COMBINE-lab/RapMap
Built-Using: simde (= 0.7.6-1)
Section: science
Priority: optional
Filename: pool/main/r/rapmap/rapmap_0.15.0+dfsg-3+b3_amd64.deb