How to Install and Uninstall skesa Package on Kali Linux
Last updated: November 22,2024
1. Install "skesa" package
Please follow the instructions below to install skesa on Kali Linux
$
sudo apt update
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$
sudo apt install
skesa
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2. Uninstall "skesa" package
Please follow the steps below to uninstall skesa on Kali Linux:
$
sudo apt remove
skesa
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$
sudo apt autoclean && sudo apt autoremove
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3. Information about the skesa package on Kali Linux
Package: skesa
Source: skesa (2.4.0-6)
Version: 2.4.0-6+b2
Installed-Size: 2350
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: libboost-iostreams1.83.0 (>= 1.83.0), libboost-program-options1.83.0 (>= 1.83.0), libboost-timer1.83.0 (>= 1.83.0), libc6 (>= 2.34), libgcc-s1 (>= 3.0), libncbi-vdb3 (>= 3.0.2+dfsg), libngs-c++3 (>= 3.0.3+dfsg), libstdc++6 (>= 13.1)
Size: 571376
SHA256: b32a8c633dedf9b3d7253c2b44a94b545b0c262fa6d65e759cfa5b6670d548fa
SHA1: f1f51e6f384a5e4684a4500a1d19949fd1a142b2
MD5sum: fbbed4ddf606775c5002129da80d1cb2
Description: strategic Kmer extension for scrupulous assemblies
SKESA is a DeBruijn graph-based de-novo assembler designed for
assembling reads of microbial genomes sequenced using Illumina.
Comparison with SPAdes and MegaHit shows that SKESA produces assemblies
that have high sequence quality and contiguity, handles low-level
contamination in reads, is fast, and produces an identical assembly for
the same input when assembled multiple times with the same or different
compute resources. SKESA has been used for assembling over 272,000 read
sets in the Sequence Read Archive at NCBI and for real-time pathogen
detection.
Description-md5:
Homepage: https://github.com/ncbi/SKESA
Section: science
Priority: optional
Filename: pool/main/s/skesa/skesa_2.4.0-6+b2_amd64.deb
Source: skesa (2.4.0-6)
Version: 2.4.0-6+b2
Installed-Size: 2350
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: libboost-iostreams1.83.0 (>= 1.83.0), libboost-program-options1.83.0 (>= 1.83.0), libboost-timer1.83.0 (>= 1.83.0), libc6 (>= 2.34), libgcc-s1 (>= 3.0), libncbi-vdb3 (>= 3.0.2+dfsg), libngs-c++3 (>= 3.0.3+dfsg), libstdc++6 (>= 13.1)
Size: 571376
SHA256: b32a8c633dedf9b3d7253c2b44a94b545b0c262fa6d65e759cfa5b6670d548fa
SHA1: f1f51e6f384a5e4684a4500a1d19949fd1a142b2
MD5sum: fbbed4ddf606775c5002129da80d1cb2
Description: strategic Kmer extension for scrupulous assemblies
SKESA is a DeBruijn graph-based de-novo assembler designed for
assembling reads of microbial genomes sequenced using Illumina.
Comparison with SPAdes and MegaHit shows that SKESA produces assemblies
that have high sequence quality and contiguity, handles low-level
contamination in reads, is fast, and produces an identical assembly for
the same input when assembled multiple times with the same or different
compute resources. SKESA has been used for assembling over 272,000 read
sets in the Sequence Read Archive at NCBI and for real-time pathogen
detection.
Description-md5:
Homepage: https://github.com/ncbi/SKESA
Section: science
Priority: optional
Filename: pool/main/s/skesa/skesa_2.4.0-6+b2_amd64.deb