How to Install and Uninstall snippy Package on Kali Linux

Last updated: May 20,2024

1. Install "snippy" package

This is a short guide on how to install snippy on Kali Linux


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                snippy
            
                    
    
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2. Uninstall "snippy" package

Learn how to uninstall snippy on Kali Linux:


    
        
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                sudo apt remove
            
                        
                snippy
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the snippy package on Kali Linux

Package: snippy
Version: 4.6.0+dfsg-4
Installed-Size: 100
Maintainer: Debian Med Packaging Team
Architecture: all
Depends: perl:any, any2fasta, bcftools, bedtools, bwa, freebayes (>= 1.3.6-2), libbio-perl-perl, libvcflib-tools, minimap2, parallel, samclip, samtools, seqtk, snp-sites, snpeff, vt
Size: 26836
SHA256: fc59e9199a4c60fedb85bd028a5ba399278da9e8be0247d0e367c4d92f6f8129
SHA1: f83e64821e25c65ce7274fe3fc438adc68109c52
MD5sum: 935f121e2e0860252fec355bd79559d5
Description: rapid haploid variant calling and core genome alignment
Snippy finds SNPs between a haploid reference genome and your NGS
sequence reads. It will find both substitutions (snps) and
insertions/deletions (indels). It will use as many CPUs as you can give
it on a single computer (tested to 64 cores). It is designed with speed
in mind, and produces a consistent set of output files in a single
folder. It can then take a set of Snippy results using the same
reference and generate a core SNP alignment (and ultimately a
phylogenomic tree).
Description-md5:
Homepage: https://github.com/tseemann/snippy/
Section: science
Priority: optional
Filename: pool/main/s/snippy/snippy_4.6.0+dfsg-4_all.deb