How to Install and Uninstall snpsift Package on Kali Linux

Last updated: November 05,2024

1. Install "snpsift" package

This is a short guide on how to install snpsift on Kali Linux


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                snpsift
            
                    
    
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2. Uninstall "snpsift" package

This guide let you learn how to uninstall snpsift on Kali Linux:


    
        
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                sudo apt remove
            
                        
                snpsift
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the snpsift package on Kali Linux

Package: snpsift
Version: 5.1+dfsg2-2
Installed-Size: 15
Maintainer: Debian Med Packaging Team
Architecture: all
Depends: default-jre, libsnpsift-java (= 5.1+dfsg2-2)
Suggests: snpeff
Size: 4400
SHA256: 44a620dac28d7a206b1f91f050189589dce45802662657d98673073a10c35dff
SHA1: e3a649232d00477fa0db9753d5cc3ed8f77cfedd
MD5sum: 2f25f078e01d730117ece5ec15cff742
Description: tool to annotate and manipulate genome variants - tool
SnpSift is a toolbox that allows one to filter and manipulate annotated files.
Once the genomic variants have been annotated, one needs to filter them out in
order to find the "interesting / relevant variants". Given the large data
files, this is not a trivial task (e.g. one cannot load all the variants into
XLS spreadsheet). SnpSift helps to perform this VCF file manipulation and
filtering required at this stage in data processing pipelines.
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This package contains the command line tool.
Description-md5:
Homepage: https://pcingola.github.io/SnpEff/ss_introduction/
Section: java
Priority: optional
Filename: pool/main/s/snpsift/snpsift_5.1+dfsg2-2_all.deb