How to Install and Uninstall ariba Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: November 22,2024

1. Install "ariba" package

This guide covers the steps necessary to install ariba on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                ariba
            
                    
    
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2. Uninstall "ariba" package

This guide let you learn how to uninstall ariba on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                ariba
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the ariba package on Ubuntu 20.10 (Groovy Gorilla)

Package: ariba
Architecture: amd64
Version: 2.14.5+ds-1
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 20455
Depends: fastaq (>= 3.12.0), python3 (<< 3.9), python3 (>= 3.8~), python3-biopython, python3-bs4, python3-dendropy, python3-matplotlib, python3-pymummer (>= 0.10.2), python3-pysam (>= 0.9.1), python3:any, libc6 (>= 2.14), libfml0 (>= 0.1-4~), libgcc-s1 (>= 3.0), libminimap0 (>= 0.2), libstdc++6 (>= 5.2), zlib1g (>= 1:1.1.4), bowtie2 (>= 2.1.0), cd-hit, mash, mummer, python3-tk
Filename: pool/universe/a/ariba/ariba_2.14.5+ds-1_amd64.deb
Size: 1944996
MD5sum: 9c90885ccfdf13dd433def6a082dd076
SHA1: 550d2f5b2d1f977a73b992bd925b567c70f289d2
SHA256: 406389420d9edc39959bada8bc1e3cf65847be1fab6679fc8615f1e974bdcb42
SHA512: a1c11b0541f1a5af8632401c8126329630a35a6022258fd4b71704dd8aaf00df2e4b6e652b14cd416b7293f7e82f54e2b3fa999a765e4b42bdd29f14e9e2c8cd
Homepage: https://github.com/sanger-pathogens/ariba
Description-en: Antibiotic Resistance Identification By Assembly
ARIBA is a tool that identifies antibiotic resistance genes by running local
assemblies.
The input is a FASTA file of reference genes and paired sequencing reads. ARIBA
reports which of the reference genes were found, plus detailed information on
the quality of the assemblies and any variants between the sequencing reads
and the reference genes.
Description-md5: 4d8147ab9fb44c5b4617a970175bc18d