How to Install and Uninstall art-nextgen-simulation-tools-profiles Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: April 28,2024

1. Install "art-nextgen-simulation-tools-profiles" package

Learn how to install art-nextgen-simulation-tools-profiles on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                art-nextgen-simulation-tools-profiles
            
                    
    
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2. Uninstall "art-nextgen-simulation-tools-profiles" package

Learn how to uninstall art-nextgen-simulation-tools-profiles on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                art-nextgen-simulation-tools-profiles
            
                    
    
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            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the art-nextgen-simulation-tools-profiles package on Ubuntu 20.10 (Groovy Gorilla)

Package: art-nextgen-simulation-tools-profiles
Architecture: all
Version: 20160605+dfsg-4build1
Priority: optional
Section: universe/science
Source: art-nextgen-simulation-tools
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 6309
Filename: pool/universe/a/art-nextgen-simulation-tools/art-nextgen-simulation-tools-profiles_20160605+dfsg-4build1_all.deb
Size: 1846348
MD5sum: b66b64372db8163b447642f473bd08aa
SHA1: 46d11acaa4db56e0442618b14aaf2d4a55d232e7
SHA256: 6592995986af0a4379a3656aecd2626b52facb6312230f92be9292ae5a575c7c
SHA512: a975d53dc2abfdf75a1a8424d72be26ea6684676a1fd21ce90954f8ffd9debbd44b4c48ee17fae76306f3e452b9e131b5bcc5b3c6c16bf496cd4250faa3a4af5
Homepage: https://www.niehs.nih.gov/research/resources/software/biostatistics/art/
Description-en: profiles for art simulation tools
ART is a set of simulation tools to generate synthetic next-generation
sequencing reads. ART simulates sequencing reads by mimicking real
sequencing process with empirical error models or quality profiles
summarized from large recalibrated sequencing data. ART can also
simulate reads using user own read error model or quality profiles. ART
supports simulation of single-end, paired-end/mate-pair reads of three
major commercial next-generation sequencing platforms: Illumina's
Solexa, Roche's 454 and Applied Biosystems' SOLiD. ART can be used to
test or benchmark a variety of method or tools for next-generation
sequencing data analysis, including read alignment, de novo assembly,
SNP and structure variation discovery. ART was used as a primary tool
for the simulation study of the 1000 Genomes Project . ART is
implemented in C++ with optimized algorithms and is highly efficient in
read simulation. ART outputs reads in the FASTQ format, and alignments
in the ALN format. ART can also generate alignments in the SAM
alignment or UCSC BED file format. ART can be used together with genome
variants simulators (e.g. VarSim) for evaluating variant calling tools
or methods.
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This package contains profile data for art-nextgen-simulation-tools.
Description-md5: e607468e6f5e720aaffb8677699543dc