How to Install and Uninstall assemblytics Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: November 26,2024

1. Install "assemblytics" package

Please follow the step by step instructions below to install assemblytics on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                assemblytics
            
                    
    
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2. Uninstall "assemblytics" package

This guide covers the steps necessary to uninstall assemblytics on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                assemblytics
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the assemblytics package on Ubuntu 20.10 (Groovy Gorilla)

Package: assemblytics
Architecture: all
Version: 1.0+ds-2
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 88
Depends: perl:any, python3, python3-numpy, r-base-core, r-cran-ggplot2, r-cran-plyr, r-cran-rcolorbrewer
Recommends: mummer
Filename: pool/universe/a/assemblytics/assemblytics_1.0+ds-2_all.deb
Size: 19016
MD5sum: 20ac7e789153f96e404e176b5819b436
SHA1: 94435165e8ed42a7267de3ae423fc9099910ebf0
SHA256: e0bbd887373f5cdab0732564fe482373ad337341aeafd90632083936bafb3b06
SHA512: 4ee548078891c9c7fe8a9a8c1ef73c1aa1492316948690ecd55f8aa1782311ccb4d34b3e5353bb73abb4e923ad85dfdb96d58d91d26852cc5bb0dcca8655f781
Homepage: http://assemblytics.com/
Description-en: detect and analyze structural variants from a genome assembly
Assemblytics incorporates a unique anchor filtering approach to increase
robustness to repetitive elements, and identifies six classes of variants
based on their distinct alignment signatures. Assemblytics can be applied
both to comparing aberrant genomes, such as human cancers, to a reference,
or to identify differences between related species.
Description-md5: c63fb59562187accf8f69b4f91182d8e