How to Install and Uninstall bowtie2 Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: November 22,2024

1. Install "bowtie2" package

Please follow the steps below to install bowtie2 on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                bowtie2
            
                    
    
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2. Uninstall "bowtie2" package

Please follow the step by step instructions below to uninstall bowtie2 on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                bowtie2
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the bowtie2 package on Ubuntu 20.10 (Groovy Gorilla)

Package: bowtie2
Architecture: amd64
Version: 2.4.1-6
Built-Using: simde (= 0.0.0.git.20200526-1)
Priority: extra
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 5511
Depends: python3, libc6 (>= 2.29), libgcc-s1 (>= 3.4), libstdc++6 (>= 9), libtbb2 (>= 2017~U7), zlib1g (>= 1:1.2.6), perl:any
Suggests: bowtie2-examples
Filename: pool/universe/b/bowtie2/bowtie2_2.4.1-6_amd64.deb
Size: 1325828
MD5sum: 8fe2041d2b6402a1a4c79ad2baa4298a
SHA1: a0c28f5e57be074160dee487e58340c9ab5d0e66
SHA256: 7297033302bf2c015f99dca8db13cd9023e7198533dceba657fe06d210b6f2f2
SHA512: ebca47d7dd1f95bc058f25d78abcab12d499e926bb4b871bee73817e69bb35c7d3c005db797628854f8a0955620a4f7cfda95b27fac4858cfa50e7e2aea2940b
Homepage: http://bowtie-bio.sourceforge.net/bowtie2
Description-en: ultrafast memory-efficient short read aligner
is an ultrafast and memory-efficient tool for aligning sequencing reads
to long reference sequences. It is particularly good at aligning reads
of about 50 up to 100s or 1,000s of characters, and particularly good
at aligning to relatively long (e.g. mammalian) genomes.
.
Bowtie 2 indexes the genome with an FM Index to keep its memory footprint
small: for the human genome, its memory footprint is typically
around 3.2 GB. Bowtie 2 supports gapped, local, and paired-end alignment modes
Description-md5: a4a641e19bb5b2750860b5cde2b844a2