How to Install and Uninstall cct-examples Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: September 14,2024

1. Install "cct-examples" package

In this section, we are going to explain the necessary steps to install cct-examples on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                cct-examples
            
                    
    
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2. Uninstall "cct-examples" package

Please follow the guidance below to uninstall cct-examples on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                cct-examples
            
                    
    
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            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the cct-examples package on Ubuntu 20.10 (Groovy Gorilla)

Package: cct-examples
Architecture: all
Version: 20170919+dfsg-1
Priority: optional
Section: universe/science
Source: cct
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 130625
Depends: bioperl, cgview
Filename: pool/universe/c/cct/cct-examples_20170919+dfsg-1_all.deb
Size: 115602572
MD5sum: cbf6b3d2a95281f8830621db8478ef1a
SHA1: cde70bf9154a89d44ced2e8d2a9c21392602566c
SHA256: 299673db8b5d1d182de1c9f466e0aaba4878be3df79632190aae3ff46d83d7fb
SHA512: 66e0e11b35ec2a235a95325f79512f68811cf4a09e3a69a99cda2b347e1fef2f13b7b4b03923f0b42f536980e9c34da8be26f9a84d86272d07db2f2b59e6fa5c
Homepage: http://stothard.afns.ualberta.ca/downloads/CCT/
Description-en: example data for testing the package cct
The CGView Comparison Tool (CCT) is a package for visually comparing
bacterial, plasmid, chloroplast, or mitochondrial sequences of interest
to existing genomes or sequence collections. The comparisons are
conducted using BLAST, and the BLAST results are presented in the form
of graphical maps that can also show sequence features, gene and protein
names, COG category assignments, and sequence composition
characteristics. CCT can generate maps in a variety of sizes, including
400 Megapixel maps suitable for posters. Comparisons can be conducted
within a particular species or genus, or all available genomes can be
used. The entire map creation process, from downloading sequences to
redrawing zoomed maps, can be completed easily using scripts included
with the CCT. User-defined features or analysis results can be included
on maps, and maps can be extensively customized. To simplify program
setup, a CCT virtual machine that includes all dependencies preinstalled
is available. Detailed tutorials illustrating the use of CCT are
included with the CCT documentation.
.
This package provides the data which can be used as example. These are
the same data as used in autopkgtest.
Description-md5: 95920a7e7f6569516d39adab7810f72d