How to Install and Uninstall dascrubber Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: May 12,2024

1. Install "dascrubber" package

This guide covers the steps necessary to install dascrubber on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                dascrubber
            
                    
    
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2. Uninstall "dascrubber" package

Please follow the instructions below to uninstall dascrubber on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                dascrubber
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the dascrubber package on Ubuntu 20.10 (Groovy Gorilla)

Package: dascrubber
Architecture: amd64
Version: 1.1-2
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 1185
Depends: libc6 (>= 2.7)
Suggests: daligner, dazzdb
Filename: pool/universe/d/dascrubber/dascrubber_1.1-2_amd64.deb
Size: 167496
MD5sum: d3bd9c216b4fdca86d111cb8de6b1786
SHA1: 74a2c10ab509315f1018f269fd13def36c437593
SHA256: b86139f5302628708ac44e248558a85f8ff0c8b92b8c8c30642064b6e67cb6fe
SHA512: 9d5387abe07f879496b95aaa129dbe258db0183f46cad20f4232b1919abafb26ef64eaf35420e29e958d309e6f0001ca99487e4361628126a2b23dc385061e61
Homepage: https://dazzlerblog.wordpress.com/
Description-en: alignment-based scrubbing pipeline for DNA sequencing reads
The Dazzler Scrubbing Suite produces a set of edited reads that are guaranteed
to
* be continuous stretches of the underlying genome (i.e. no unremoved
adapters and not chimers)
* have no very low quality stretches (i.e. the error rate never exceeds some
reasonable maximum, 20% or so in the case of Pacbio data).
Its secondary goal is to do so with the minimum removal of data and splitting
of reads.
Description-md5: 1cf5e69497508e24b281ab1411482109