How to Install and Uninstall liballelecount-perl Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: May 21,2024

1. Install "liballelecount-perl" package

This is a short guide on how to install liballelecount-perl on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                liballelecount-perl
            
                    
    
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2. Uninstall "liballelecount-perl" package

This is a short guide on how to uninstall liballelecount-perl on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                liballelecount-perl
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the liballelecount-perl package on Ubuntu 20.10 (Groovy Gorilla)

Package: liballelecount-perl
Architecture: all
Version: 4.1.0-3
Priority: optional
Section: universe/perl
Source: allelecount
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 69
Depends: perl:any, libconst-fast-perl, libdevel-cover-perl, libfile-slurp-perl, libfile-which-perl, libipc-system-simple-perl, libpod-coverage-perl, libtest-fatal-perl (>= 0.013), libtry-tiny-perl
Filename: pool/universe/a/allelecount/liballelecount-perl_4.1.0-3_all.deb
Size: 19828
MD5sum: 89368ba3a3b72a1d134b2bf8de62b45d
SHA1: e853ff7af6b93de1c9c6b4930d67cb6617190d4c
SHA256: eb33fcca670d35f531696f32bab59b1fd2b610198f6d463137ef23f0ce7e6d98
SHA512: 54c3dbf73f93d553bdf6aef6f4dab8924d5f05cbfd360e4f4eb5f7f21292ea49c97bc60f90a21a47107ec04ca90ae6ce162c88a89bd6de3c38e538d706d8a0df
Homepage: https://github.com/cancerit/alleleCount
Description-en: Perl interface to NGS copy number algorithms
Support code for NGS copy number algorithms. Takes a file of locations
and a [cr|b]am file and generates a count of coverage of each allele
[ACGT] at that location (given any filter settings).
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The alleleCount package primarily exists to prevent code duplication
between some other projects, specifically AscatNGS and Battenberg.
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This package provided the Perl interface to alleleCounter providing
Sanger::CGP::AlleleCount::Genotype.
Description-md5: 3643df2ba0a59c066ab75e82c8e21f1a