How to Install and Uninstall libbio-db-gff-perl Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: November 26,2024

1. Install "libbio-db-gff-perl" package

Please follow the steps below to install libbio-db-gff-perl on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                libbio-db-gff-perl
            
                    
    
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2. Uninstall "libbio-db-gff-perl" package

This is a short guide on how to uninstall libbio-db-gff-perl on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                libbio-db-gff-perl
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the libbio-db-gff-perl package on Ubuntu 20.10 (Groovy Gorilla)

Package: libbio-db-gff-perl
Architecture: all
Version: 1.7.4-1
Priority: optional
Section: universe/perl
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Michael R. Crusoe
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 854
Depends: perl:any, libapache-dbi-perl, libbio-perl-perl, libbio-db-biofetch-perl, libcgi-pm-perl
Breaks: libbio-perl-perl (<< 1.7.3)
Replaces: libbio-perl-perl (<< 1.7.3)
Filename: pool/universe/libb/libbio-db-gff-perl/libbio-db-gff-perl_1.7.4-1_all.deb
Size: 272888
MD5sum: 6015827a6c0e0ccdab7a1de9e7def4bd
SHA1: 6dfb6c5aa77995b905056024a0fd33bcc6629223
SHA256: 60c47b79fe2c4bcbf9c5bf89c4f54024784a35ba50560baf2f796ea8d90db502
SHA512: f82744d8ef74c8943a4201fa3b63221bbf03d4396558c3b83f528b6d7e6209f2ea19d7587d7a218a0ac78c69891b21a0c6b9f4441392d184fa76a2f8116250b9
Homepage: https://metacpan.org/release/Bio-DB-GFF
Description-en: Storage and retrieval of sequence annotation data
Bio::DB::GFF provides fast indexed access to a sequence annotation database.
It supports multiple database types (ACeDB, relational), and multiple schemas
through a system of adaptors and aggregators.
.
The following operations are supported by this module:
.
- retrieving a segment of sequence based on the ID of a landmark
.
- retrieving the DNA from that segment
.
- finding all annotations that overlap with the segment
.
- finding all annotations that are completely contained within the
segment
.
- retrieving all annotations of a particular type, either within a
segment, or globally
.
- conversion from absolute to relative coordinates and back again,
using any arbitrary landmark for the relative coordinates
.
- using a sequence segment to create new segments based on relative
offsets
Description-md5: 1ce05f595fa0ba15a3a25414321787aa