How to Install and Uninstall quicktree Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: November 07,2024

1. Install "quicktree" package

Please follow the instructions below to install quicktree on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                quicktree
            
                    
    
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2. Uninstall "quicktree" package

Please follow the step by step instructions below to uninstall quicktree on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                quicktree
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the quicktree package on Ubuntu 20.10 (Groovy Gorilla)

Package: quicktree
Architecture: amd64
Version: 2.5-5
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 57
Depends: libc6 (>= 2.29)
Suggests: hmmer | hmmer2
Filename: pool/universe/q/quicktree/quicktree_2.5-5_amd64.deb
Size: 21168
MD5sum: 76f0c7c53b3277254e02ee088de5f500
SHA1: aae6c158b36d2bef7d7fc3d6b5d926253f44baf7
SHA256: 591709771acb0e4ab24790ba98c753d5d3f478ccc2b2c788df37eb6d5ce2a3d6
SHA512: 0b945ad10bc473f899d33c7ec4157a6f614ba0b812b1d5e7b1361c1f7f18bc2d14f6ea32d6ae2459213b803d83d1a207fe203d4bf0bffdc1df2dac16e415a415
Homepage: https://github.com/khowe/quicktree/
Description-en: Neighbor-Joining algorithm for phylogenies
QuickTree is an efficient implementation of the Neighbor-Joining
algorithm (PMID: 3447015), capable of reconstructing phylogenies from
huge alignments in time less than the age of the universe.
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QuickTree accepts both distance matrix and multiple-sequence-aligment
inputs. The former should be in PHYLIP format. The latter should be
in Stockholm format, which is the native alignment format for the Pfam
database. Alignments in various formats can be converted to Stockholm
format with the sreformat program, which is part of the HMMer package
(hmmer.org).
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The tress are written to stdout, in the Newick/New-Hampshire format
use by PHYLIP and many other programs
Description-md5: ee91e2e60e1d2fcf01f233db09d1a540