How to Install and Uninstall readucks Package on Ubuntu 20.10 (Groovy Gorilla)
Last updated: November 07,2024
1. Install "readucks" package
In this section, we are going to explain the necessary steps to install readucks on Ubuntu 20.10 (Groovy Gorilla)
$
sudo apt update
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$
sudo apt install
readucks
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2. Uninstall "readucks" package
This guide covers the steps necessary to uninstall readucks on Ubuntu 20.10 (Groovy Gorilla):
$
sudo apt remove
readucks
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$
sudo apt autoclean && sudo apt autoremove
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3. Information about the readucks package on Ubuntu 20.10 (Groovy Gorilla)
Package: readucks
Architecture: all
Version: 0.0.3-2
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 107
Depends: python3:any, python3-parasail, python3-biopython
Filename: pool/universe/r/readucks/readucks_0.0.3-2_all.deb
Size: 20280
MD5sum: 8f4a3d9ce212911906a0c16e9e96f492
SHA1: d4c76ce4786d668b5d1b95b144b0b6b4078d2537
SHA256: b6d40ecafa497becfe5e350db854ae9279ee2c9d1e2dfe19999a52c3b7262cfd
SHA512: b3f0f1cddf0fe88fbec5789c78b7c3c1e8e58df2439b2713403a1f5ee738daf7466ad5becfcb288d2287c64382603e1ac6ecc386bf18c994007b1446d352d860
Homepage: https://github.com/artic-network/readucks
Description-en: Nanopore read de-multiplexer (read demux -> readux -> readucks, innit)
This package is inspired by the demultiplexing options in
porechop but without the adapter trimming options - it just demuxes.
It uses the parasail library with its Python bindings to do
pairwise alignment which provides a considerable speed up over
the seqan library used by porechop due to its low-level use
of vector processor instructions.
Description-md5: 12ca1954fb7de3e6c5716ec5d507c652
Architecture: all
Version: 0.0.3-2
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 107
Depends: python3:any, python3-parasail, python3-biopython
Filename: pool/universe/r/readucks/readucks_0.0.3-2_all.deb
Size: 20280
MD5sum: 8f4a3d9ce212911906a0c16e9e96f492
SHA1: d4c76ce4786d668b5d1b95b144b0b6b4078d2537
SHA256: b6d40ecafa497becfe5e350db854ae9279ee2c9d1e2dfe19999a52c3b7262cfd
SHA512: b3f0f1cddf0fe88fbec5789c78b7c3c1e8e58df2439b2713403a1f5ee738daf7466ad5becfcb288d2287c64382603e1ac6ecc386bf18c994007b1446d352d860
Homepage: https://github.com/artic-network/readucks
Description-en: Nanopore read de-multiplexer (read demux -> readux -> readucks, innit)
This package is inspired by the demultiplexing options in
porechop but without the adapter trimming options - it just demuxes.
It uses the parasail library with its Python bindings to do
pairwise alignment which provides a considerable speed up over
the seqan library used by porechop due to its low-level use
of vector processor instructions.
Description-md5: 12ca1954fb7de3e6c5716ec5d507c652