How to Install and Uninstall resfinder-db Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: November 22,2024

1. Install "resfinder-db" package

Please follow the steps below to install resfinder-db on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                resfinder-db
            
                    
    
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2. Uninstall "resfinder-db" package

Please follow the guidelines below to uninstall resfinder-db on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                resfinder-db
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the resfinder-db package on Ubuntu 20.10 (Groovy Gorilla)

Package: resfinder-db
Architecture: all
Version: 0.0+git20200408.0322c0d-1
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 128205
Recommends: resfinder
Filename: pool/universe/r/resfinder-db/resfinder-db_0.0+git20200408.0322c0d-1_all.deb
Size: 12929756
MD5sum: 178c9bf3114794c451bd1f21cff77323
SHA1: 6d8a7b39dad1aba1d4175c1d95c9fd4befabf5de
SHA256: 9d03738b53c2635f8824e7e07252945ff5f250539c88c1839429d54eeffb90e0
SHA512: 2c1fc537cfe57414768786c188c137dcfff3a81184f1bdbfda2e7bf2188bb663e5b0bd6a45dbde99911c222fb6fda9f3327cd5b4cca4edd3de88d7a997b2b65c
Homepage: https://bitbucket.org/genomicepidemiology/resfinder
Description-en: ResFinder database is a curated database of acquired resistance genes
ResFinder identifies acquired antimicrobial resistance genes in total or
partial sequenced isolates of bacteria.
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ResFinder that uses BLAST for identification of acquired antimicrobial
resistance genes in whole-genome data. As input, the method can use both
pre-assembled, complete or partial genomes, and short sequence reads
from four different sequencing platforms. The method was evaluated on
1862 GenBank files containing 1411 different resistance genes, as well
as on 23 de-novo-sequenced isolates.
.
This package provides the database needed for resfinder.
Description-md5: a4cfc4a3c540446a5b15cae84ba390d4