How to Install and Uninstall snp-sites Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: November 26,2024

1. Install "snp-sites" package

This guide let you learn how to install snp-sites on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                snp-sites
            
                    
    
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2. Uninstall "snp-sites" package

This is a short guide on how to uninstall snp-sites on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                snp-sites
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the snp-sites package on Ubuntu 20.10 (Groovy Gorilla)

Package: snp-sites
Architecture: amd64
Version: 2.5.1-1
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 35
Depends: libc6 (>= 2.4), libsnp-sites1
Filename: pool/universe/s/snp-sites/snp-sites_2.5.1-1_amd64.deb
Size: 10496
MD5sum: e3ec7128a582abd8d427cc3c1e78a91a
SHA1: 059babb438f417402150300ca1aaaa35183b2471
SHA256: aa229677886694aeed9df715daf4344fe3e80a6d7500f3b5d67c60d3d4f73a7e
SHA512: 2d8d32bf9eb1fdf10ad76e772ae1927fe5396f6c1d800c693dcb175a301000ddc89517139a7b2907fe3ea2480032bbb6bcca8d8444d6223aef628e34b0786139
Homepage: https://github.com/sanger-pathogens/snp-sites
Description-en: Binary code for the package snp-sites
This program finds single nucleotide polymorphism (SNP) sites from
multi-fasta alignment input files (which might be compressed). Its
output can be in various widely used formats (Multi Fasta Alignment,
Vcf, phylip).
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The software has been developed at the Wellcome Trust Sanger Institute.
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A Single Nucleotide - polymorphism (SNP, pronounced snip; plural snips)
is a DNA sequence variation occurring when a Single Nucleotide — A, T, C
or G — in the genome (or other shared sequence) differs between members
of a biological species or paired chromosomes. For example, two
sequenced DNA fragments from different individuals, AAGCCTA to AAGCTTA,
contain a difference in a single nucleotide. In this case there are two
alleles. Almost all common SNPs have only two alleles.
Description-md5: 3d6d30c82729352bdf61e8d907df5811