How to Install and Uninstall srst2 Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: November 16,2024

1. Install "srst2" package

Please follow the guidance below to install srst2 on Ubuntu 20.10 (Groovy Gorilla)


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                srst2
            
                    
    
    Copied

2. Uninstall "srst2" package

Please follow the guidelines below to uninstall srst2 on Ubuntu 20.10 (Groovy Gorilla):


    
        
            $
        

        
            
                sudo apt remove
            
                        
                srst2
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the srst2 package on Ubuntu 20.10 (Groovy Gorilla)

Package: srst2
Architecture: amd64
Version: 0.2.0-7
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 253
Depends: python3:any, bowtie2, cd-hit, samtools, python3-scipy, python3-biopython
Recommends: python3-rpy2
Filename: pool/universe/s/srst2/srst2_0.2.0-7_amd64.deb
Size: 60676
MD5sum: 31227de36ed7782046f7f99ba4db54e3
SHA1: ed3c85e9869d06d9f906b4964cbb2eadb0085f49
SHA256: 4dbeb77d9cebcc352c524d55a8b7a018635973b2453a4fa491367af89392598d
SHA512: 6d07e52412783a1cc5da45844e0485f01cf90601d087e9ddafd41dafe99b7565266a3477fc97b064a314b807bc5ff4d256f31a3ec12c364803db4eb19208e931
Homepage: https://katholt.github.io/srst2/
Description-en: Short Read Sequence Typing for Bacterial Pathogens
This program is designed to take Illumina sequence data, a MLST database
and/or a database of gene sequences (e.g. resistance genes, virulence
genes, etc) and report the presence of STs and/or reference genes.
Description-md5: 0b05e0f1dc4b9a9dedc867def03c95b1